SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB21969

Signal sequence   MKLIRVTLFLCALAILLLVTPTSSLQLKH

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SI57,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB21969.cif

Structure  SPKB21969.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3237.09534

Aliphatic index  174.8275862

Isoelectric point  10.79324001

Charge (pH=7)   3.026325295

Topological polar surface area  1156.19

Aromaticity  0.034482759

Average rotatable bonds  3.724137931

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  42

X logP energy  -4.85703

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.