SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB21797

Signal sequence   MERKKFSSKFIHLLIVFLLLCTFLSRTES

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LU08,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB21797.cif

Structure  SPKB21797.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3488.25324

Aliphatic index  117.5862069

Isoelectric point  10.50064361

Charge (pH=7)   3.029577196

Topological polar surface area  1304.64

Aromaticity  0.137931034

Average rotatable bonds  4.137931034

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  46

X logP energy  -7.00906

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.