SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB21787

Signal sequence   MKLSCLVFLIVSSLVSSSLA

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LPC3,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB21787.cif

Structure  SPKB21787.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2097.59954

Aliphatic index  165.5

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  763.62

Aromaticity  0.05

Average rotatable bonds  3.5

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -6.1176

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.