SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB21587

Signal sequence   MATKSTSKPLLLSFLMMSYLISTFHVITVAEG

Length  32

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FGG1,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Cytoplasmic vesicle

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB21587.cif

Structure  SPKB21587.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3518.24564

Aliphatic index  109.6875

Isoelectric point  9.258471166

Charge (pH=7)   1.089228031

Topological polar surface area  1276.95

Aromaticity  0.09375

Average rotatable bonds  3.59375

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  50

X logP energy  -9.4945

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.