SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB21394

Signal sequence   MDIRSDDAKKPMMMWFLGMLLFSMVAESNA

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q96509,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB21394.cif

Structure  SPKB21394.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3467.16784

Aliphatic index  71.66666667

Isoelectric point  4.499315233

Charge (pH=7)   -0.999494504

Topological polar surface area  1281.14

Aromaticity  0.1

Average rotatable bonds  3.9

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  48

X logP energy  -8.11433

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.