SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20958

Signal sequence   MGSDGDKKKKFIVAGSVSGFLVIMVVSVAVVTS

Length  33

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8GXA1,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20958.cif

Structure  SPKB20958.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3357.02754

Aliphatic index  111.8181818

Isoelectric point  10.33332288

Charge (pH=7)   1.997697132

Topological polar surface area  1294.58

Aromaticity  0.060606061

Average rotatable bonds  3.484848485

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  48

X logP energy  -12.3371

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.