SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20955

Signal sequence   MKAHKTVFNQHPLSLNKLFFVLLLIFFLPPASPA

Length  34

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  Q8GUQ5,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20955.cif

Structure  SPKB20955.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3880.73874

Aliphatic index  117.6470588

Isoelectric point  11.10310314

Charge (pH=7)   3.17891738

Topological polar surface area  1313.84

Aromaticity  0.147058824

Average rotatable bonds  3.529411765

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  47

X logP energy  -4.1711

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.