SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20938

Signal sequence   MHYKKSIIGIAVTATAIIAG

Length  20

Organism  Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)

UniProt ID  Q8CVD0,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20938.cif

Structure  SPKB20938.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2058.51014

Aliphatic index  132

Isoelectric point  10.24773591

Charge (pH=7)   2.087452908

Topological polar surface area  777.86

Aromaticity  0.05

Average rotatable bonds  3.4

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  -5.4825

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.