SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20876

Signal sequence   MRRSTHTRRRLLLGGLGLLGLGSLLAWTSLPFGAQP

Length  36

Organism  Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

UniProt ID  Q88F89,

Motif  1..36



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20876.cif

Structure  SPKB20876.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3903.65324

Aliphatic index  113.8888889

Isoelectric point  13.10207721

Charge (pH=7)   5.088876834

Topological polar surface area  1582.68

Aromaticity  0.055555556

Average rotatable bonds  3.527777778

Number of hydrogen bond donors  59

Number of hydrogen bond acceptors  51

X logP energy  -14.94535

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.