SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20875

Signal sequence   MDTPGSLQVIAIISLLLVGGAS

Length  22

Organism  Walleye dermal sarcoma virus (WDSV)

UniProt ID  Q88938,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20875.cif

Structure  SPKB20875.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2155.57784

Aliphatic index  159.5454545

Isoelectric point  3.749987361

Charge (pH=7)   -1.001569216

Topological polar surface area  826.94

Aromaticity  0

Average rotatable bonds  3.181818182

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -7.495

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.