SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20842

Signal sequence   MYGIEYTTILIFLTSITLLNYMLKSITRIMDYIIYRFLLIVVILATIIKA

Length  50

Organism  Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1]) (RV-A)

UniProt ID  Q86515,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20842.cif

Structure  SPKB20842.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5890.30704

Aliphatic index  171.6

Isoelectric point  9.50460484

Charge (pH=7)   1.995357145

Topological polar surface area  2045.74

Aromaticity  0.14

Average rotatable bonds  3.9

Number of hydrogen bond donors  75

Number of hydrogen bond acceptors  74

X logP energy  -3.18626

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.