SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20755

Signal sequence   MSMARRDFIKQTAAAAAATVAGVPLTGYTQNIVTESEA

Length  38

Organism  Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)

UniProt ID  Q7W733,

Motif  1..38



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20755.cif

Structure  SPKB20755.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3942.47454

Aliphatic index  77.36842105

Isoelectric point  6.577935471

Charge (pH=7)   0.000828958

Topological polar surface area  1684.06

Aromaticity  0.052631579

Average rotatable bonds  3.368421053

Number of hydrogen bond donors  59

Number of hydrogen bond acceptors  58

X logP energy  -20.75766

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.