SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20593

Signal sequence   MLFRYITFHREKVLYLTAACIFGVYISLHDA

Length  31

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  Q6SWB9,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20593.cif

Structure  SPKB20593.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3692.39754

Aliphatic index  116.4516129

Isoelectric point  8.498897485

Charge (pH=7)   1.117196473

Topological polar surface area  1339.48

Aromaticity  0.193548387

Average rotatable bonds  3.774193548

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  47

X logP energy  -4.79546

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.