SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20592

Signal sequence   MSPVYVNLLGSVGLLAFWYFSY

Length  22

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  Q6SW94,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20592.cif

Structure  SPKB20592.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2526.97534

Aliphatic index  115

Isoelectric point  6.080201585

Charge (pH=7)   -0.004566943

Topological polar surface area  845.89

Aromaticity  0.272727273

Average rotatable bonds  3.318181818

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -1.8199

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.