SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20568

Signal sequence   MARSSGPLCLLLLGGLVAGILSGASA

Length  26

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  Q6PBD1,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20568.cif

Structure  SPKB20568.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2427.94614

Aliphatic index  146.5384615

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  924.85

Aromaticity  0

Average rotatable bonds  3.038461538

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  34

X logP energy  -9.79873

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.