SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20546

Signal sequence   MATTRVSHVLGFLLWISLLIFVSIG

Length  25

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q6NMF0,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20546.cif

Structure  SPKB20546.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2774.40324

Aliphatic index  163.6

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  969.24

Aromaticity  0.12

Average rotatable bonds  3.52

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  34

X logP energy  -3.41693

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.