SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20538

Signal sequence   MKMTRRAFVKANAAASAAAVAGITLPASAA

Length  30

Organism  Photobacterium profundum (strain SS9)

UniProt ID  Q6LTV9,

Motif  1..30



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20538.cif

Structure  SPKB20538.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2918.46884

Aliphatic index  85.33333333

Isoelectric point  12.53174703

Charge (pH=7)   3.997387609

Topological polar surface area  1198.28

Aromaticity  0.033333333

Average rotatable bonds  3.133333333

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  42

X logP energy  -14.60686

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.