SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20529

Signal sequence   MARGATWTRRLHLHGLFLAVLLLLTLPAGSTA

Length  32

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q6L590,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20529.cif

Structure  SPKB20529.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3458.17454

Aliphatic index  134.375

Isoelectric point  12.80107165

Charge (pH=7)   3.179792547

Topological polar surface area  1316.63

Aromaticity  0.0625

Average rotatable bonds  3.40625

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  44

X logP energy  -9.04539

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.