SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20448

Signal sequence   MGRLVALSLLGIGLALLGERFLALRSRLKASREVESVDLPNCRLIKGIETGAEDIDILPNGLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRALELRVSWGFDLASFNPHGISTFIDDDDTVYLFVVNHPEFKNTVEIFKFQEEENSLLHLKTIKHELLPSVNDVIAVGPSHFYATNDHYFSDPFLKYLETYLNLRWANVVYYSPEEVKLVAEGFDSANGINISPDKKYVYVADILAHEIHVLEKQPNMNLTQLKVLQLGTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNHPPSSEVLRIQNILSEKPSVTTVYINNGSVLQGSSVATIYDRKLLVGTLYQRALYCEL

Length  100

Organism  Rattus norvegicus (Rat)

UniProt ID  Q6AXM8,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20448.cif

Structure  SPKB20448.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  39617.40554

Aliphatic index  105.960452

Isoelectric point  5.22788344

Charge (pH=7)   -12.15528704

Topological polar surface area  15679.76

Aromaticity  0.096045198

Average rotatable bonds  2.824858757

Number of hydrogen bond donors  532

Number of hydrogen bond acceptors  529

X logP energy  -279.42066

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.