SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20441

Signal sequence   MATARLSAMKPPRSCALIFLCAFSMATAPTNA

Length  32

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  Q69572,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20441.cif

Structure  SPKB20441.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3344.04474

Aliphatic index  73.75

Isoelectric point  9.914555929

Charge (pH=7)   2.873733211

Topological polar surface area  1253.34

Aromaticity  0.0625

Average rotatable bonds  3.21875

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  48

X logP energy  -13.45616

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.