SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20394

Signal sequence   MLTKPKPNSKFSILFTFLLLLSFLIFVARS

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q66GQ3,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20394.cif

Structure  SPKB20394.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3473.30684

Aliphatic index  130

Isoelectric point  11.92450937

Charge (pH=7)   3.997095887

Topological polar surface area  1194.07

Aromaticity  0.166666667

Average rotatable bonds  3.766666667

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  43

X logP energy  -4.21623

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.