SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20365

Signal sequence   MGGCSTRGKRPSALSLLLLLLLSGIAA

Length  27

Organism  Rattus norvegicus (Rat)

UniProt ID  Q62949,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20365.cif

Structure  SPKB20365.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2699.30894

Aliphatic index  141.1111111

Isoelectric point  11.48119255

Charge (pH=7)   2.935707927

Topological polar surface area  1062.1

Aromaticity  0

Average rotatable bonds  3.37037037

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  38

X logP energy  -10.80206

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.