SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20311

Signal sequence   MARRDQLVSFLCFFLIVSAVA

Length  21

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5Z9C8,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20311.cif

Structure  SPKB20311.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2386.89894

Aliphatic index  130

Isoelectric point  8.54983383

Charge (pH=7)   0.936449445

Topological polar surface area  889.97

Aromaticity  0.142857143

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  30

X logP energy  -5.03126

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.