SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20248

Signal sequence   MDFPCLWLGLLLPLVAA

Length  17

Organism  Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)

UniProt ID  Q5RFD6,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20248.cif

Structure  SPKB20248.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1872.35694

Aliphatic index  166.4705882

Isoelectric point  3.749971454

Charge (pH=7)   -1.063543932

Topological polar surface area  564.43

Aromaticity  0.117647059

Average rotatable bonds  3.176470588

Number of hydrogen bond donors  19

Number of hydrogen bond acceptors  21

X logP energy  1.8956

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.