SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20170

Signal sequence   MVMAPIPQPWHQWPFLILFFLVLFSCES

Length  28

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5JJV0,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20170.cif

Structure  SPKB20170.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3378.11364

Aliphatic index  107.8571429

Isoelectric point  5.36107726

Charge (pH=7)   -0.971306203

Topological polar surface area  1038.06

Aromaticity  0.214285714

Average rotatable bonds  3.464285714

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  38

X logP energy  1.3222

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.