SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20042

Signal sequence   MKKDTGFDSKIEKLARTTASKTGRRGFIGRLGGFLVGSALLPLLPVDRRSRLGGEVQ

Length  57

Organism  Methylophilus methylotrophus (Bacterium W3A1)

UniProt ID  Q59543,

Motif  1..57



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20042.cif

Structure  SPKB20042.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6159.21004

Aliphatic index  88.94736842

Isoelectric point  11.88902745

Charge (pH=7)   7.001375649

Topological polar surface area  2630.17

Aromaticity  0.052631579

Average rotatable bonds  3.754385965

Number of hydrogen bond donors  96

Number of hydrogen bond acceptors  85

X logP energy  -28.38851

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.