SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB20013

Signal sequence   MTISRRDLLKAQAAGIAAMAANIPLSSQAPA

Length  31

Organism  Paracoccus pantotrophus (Thiosphaera pantotropha)

UniProt ID  Q56350,

Motif  1..31



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB20013.cif

Structure  SPKB20013.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3138.69394

Aliphatic index  104.516129

Isoelectric point  11.47969964

Charge (pH=7)   1.998129127

Topological polar surface area  1316.05

Aromaticity  0

Average rotatable bonds  3.322580645

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  45

X logP energy  -15.55766

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.