SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19923

Signal sequence   MKVFVLLTLAVLLMVSADMAFA

Length  22

Organism  Magallana gigas (Pacific oyster) (Crassostrea gigas)

UniProt ID  Q4GWV4,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19923.cif

Structure  SPKB19923.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2384.03484

Aliphatic index  159.5454545

Isoelectric point  6.337367167

Charge (pH=7)   -0.00186425

Topological polar surface area  778.2

Aromaticity  0.090909091

Average rotatable bonds  3.545454545

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  30

X logP energy  -0.7653

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.