SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19887

Signal sequence   MTRVEDFFSKQIDFCKRKKKIYLAIVASVLLVAAVIGVVA

Length  40

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  Q43143,

Motif  1..40



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19887.cif

Structure  SPKB19887.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4471.47274

Aliphatic index  131.5

Isoelectric point  10.37352748

Charge (pH=7)   3.936345468

Topological polar surface area  1688.03

Aromaticity  0.1

Average rotatable bonds  3.825

Number of hydrogen bond donors  61

Number of hydrogen bond acceptors  58

X logP energy  -9.07296

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.