SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19880

Signal sequence   MAPIKEFISKFSDFKNNKKLILSSAAIALLLLASIVGIAA

Length  40

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q42534,

Motif  1..40



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19880.cif

Structure  SPKB19880.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4248.17644

Aliphatic index  141.75

Isoelectric point  10.62727356

Charge (pH=7)   2.998730737

Topological polar surface area  1581.46

Aromaticity  0.075

Average rotatable bonds  3.65

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  56

X logP energy  -10.0304

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.