SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19793

Signal sequence   MAPHLNIVPSMFVLLLLFISASKVQS

Length  26

Organism  Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)

UniProt ID  Q39786,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19793.cif

Structure  SPKB19793.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2856.52074

Aliphatic index  146.1538462

Isoelectric point  9.702001779

Charge (pH=7)   1.088598356

Topological polar surface area  995.04

Aromaticity  0.076923077

Average rotatable bonds  3.5

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  37

X logP energy  -4.9423

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.