SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19784

Signal sequence   MSKSSYNHIFILILCLCLRSSSA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q38908,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19784.cif

Structure  SPKB19784.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2587.10834

Aliphatic index  123.0434783

Isoelectric point  8.801024153

Charge (pH=7)   1.963795199

Topological polar surface area  1004.82

Aromaticity  0.086956522

Average rotatable bonds  3.739130435

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  38

X logP energy  -9.60253

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.