SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19440

Signal sequence   MSENKCPVMHGSATTTENSMA

Length  21

Organism  Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)

UniProt ID  Q12PF6,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19440.cif

Structure  SPKB19440.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2226.49434

Aliphatic index  23.33333333

Isoelectric point  5.490571831

Charge (pH=7)   -0.969826114

Topological polar surface area  973.39

Aromaticity  0

Average rotatable bonds  3.476190476

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  38

X logP energy  -15.1887

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.