SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19364

Signal sequence   MSMACYYLAAAAAGLALLLLHAPLTDA

Length  27

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q0D5R2,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19364.cif

Structure  SPKB19364.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2736.29784

Aliphatic index  134.4444444

Isoelectric point  5.289758428

Charge (pH=7)   -0.97433567

Topological polar surface area  958.03

Aromaticity  0.074074074

Average rotatable bonds  3.074074074

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  37

X logP energy  -5.2113

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.