SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19316

Signal sequence   MDKAQHTQGKCPVAHG

Length  16

Organism  Shewanella frigidimarina (strain NCIMB 400)

UniProt ID  Q082Q2,

Motif  1..16



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19316.cif

Structure  SPKB19316.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1707.94284

Aliphatic index  30.625

Isoelectric point  8.555371092

Charge (pH=7)   1.117684182

Topological polar surface area  744.14

Aromaticity  0

Average rotatable bonds  3.5

Number of hydrogen bond donors  25

Number of hydrogen bond acceptors  27

X logP energy  -9.6059

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.