SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19224

Signal sequence   METQKRHEYHSVCHTCRRTENTRMKVKMMSSSNRVLVIALALTLYIVEVASAETLCGGELVDALQFVCEDRGFYFSRPTSRSNSRRSQNRGIVEECCFRSCDLNLLEQYCAKPAKSERDVSATSLQIIPMVPTIKQDVPRKHVTVKYSKYEAWQRKAAQRLRRGVPAILRARKFRRQAVKIKAQEQAMFHRPLITLPSKLPPVLPPTDNYVSHN

Length  100

Organism  Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)

UniProt ID  Q02816,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19224.cif

Structure  SPKB19224.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  24636.62244

Aliphatic index  79.25233645

Isoelectric point  10.42620703

Charge (pH=7)   18.06323708

Topological polar surface area  10344.59

Aromaticity  0.065420561

Average rotatable bonds  3.859813084

Number of hydrogen bond donors  374

Number of hydrogen bond acceptors  345

X logP energy  -147.87199

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.