SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB19117

Signal sequence   MARGAGLVFFVGVWVVSCLA

Length  20

Organism  Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2)

UniProt ID  P89475,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB19117.cif

Structure  SPKB19117.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2082.55264

Aliphatic index  126.5

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  714.14

Aromaticity  0.15

Average rotatable bonds  3.15

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  25

X logP energy  -2.91653

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.