SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB18456

Signal sequence   MKKLFVVLVVMPLIYGDNFPCSKLTNRT

Length  28

Organism  Porcine transmissible gastroenteritis coronavirus (strain Miller) (TGEV)

UniProt ID  P33470,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB18456.cif

Structure  SPKB18456.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3227.97554

Aliphatic index  111.0714286

Isoelectric point  10.13096674

Charge (pH=7)   2.934717241

Topological polar surface area  1175.8

Aromaticity  0.107142857

Average rotatable bonds  3.75

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  43

X logP energy  -6.51443

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.