SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB18406

Signal sequence   MHLEVIVQSYKKSKYYFSHTFYLYKFIVVNSPDMLHISQLGLFLGLFAIVMHSANL

Length  56

Organism  Human herpesvirus 6A (strain GS) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  P30005,

Motif  1..56



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB18406.cif

Structure  SPKB18406.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6583.81814

Aliphatic index  113.0357143

Isoelectric point  9.467883228

Charge (pH=7)   2.358410063

Topological polar surface area  2363.55

Aromaticity  0.178571429

Average rotatable bonds  3.821428571

Number of hydrogen bond donors  82

Number of hydrogen bond acceptors  86

X logP energy  -10.7463

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.