SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB18336

Signal sequence   MGVTIRNRNYDHGSLPFLQSLLAILLVTTTTLHINGVEA

Length  39

Organism  Daucus carota (Wild carrot)

UniProt ID  P26792,

Motif  1..39



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB18336.cif

Structure  SPKB18336.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4279.96754

Aliphatic index  127.4358974

Isoelectric point  7.706814115

Charge (pH=7)   0.181167051

Topological polar surface area  1750.29

Aromaticity  0.051282051

Average rotatable bonds  3.564102564

Number of hydrogen bond donors  61

Number of hydrogen bond acceptors  59

X logP energy  -16.78806

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.