SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB18253

Signal sequence   MNMSLSRIVKAAPLRRTTLAMALGALGAAPAAYA

Length  34

Organism  Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)

UniProt ID  P24328,

Motif  1..34



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB18253.cif

Structure  SPKB18253.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3459.19024

Aliphatic index  106.7647059

Isoelectric point  12.22713629

Charge (pH=7)   3.996828917

Topological polar surface area  1362

Aromaticity  0.029411765

Average rotatable bonds  3.264705882

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  48

X logP energy  -13.44849

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.