SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB18085

Signal sequence   MSVWALFAFFSLFLSLSVRGSA

Length  22

Organism  Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)

UniProt ID  P16579,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB18085.cif

Structure  SPKB18085.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2436.89704

Aliphatic index  110.9090909

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  853.26

Aromaticity  0.227272727

Average rotatable bonds  3.409090909

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  30

X logP energy  -4.56073

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.