SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17987

Signal sequence   MGPRSSTRIPIPLMLTIRIALALSCVHLASS

Length  31

Organism  Newcastle disease virus (strain Chicken/Australia-Victoria/32) (NDV)

UniProt ID  P12572,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17987.cif

Structure  SPKB17987.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3306.04964

Aliphatic index  132.2580645

Isoelectric point  12.19926532

Charge (pH=7)   3.02690874

Topological polar surface area  1265.94

Aromaticity  0

Average rotatable bonds  3.387096774

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  46

X logP energy  -11.86239

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.