SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17963

Signal sequence   MSSPLKNALVTAMLAGGALS

Length  20

Organism  Cryphonectria parasitica (Chestnut blight fungus) (Endothia parasitica)

UniProt ID  P11838,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  5HCT,

Predicted Structure ID  SPKB17963.cif

Structure  SPKB17963.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1932.32394

Aliphatic index  112.5

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  757.46

Aromaticity  0

Average rotatable bonds  3.15

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  29

X logP energy  -8.8332

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.