SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17916

Signal sequence   MKVLWALLVVTILAGCRA

Length  18

Organism  Thryonomys swinderianus (Greater cane rat) (African grasscutter)

UniProt ID  P0DUZ9,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17916.cif

Structure  SPKB17916.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1957.50964

Aliphatic index  173.3333333

Isoelectric point  9.833242293

Charge (pH=7)   1.935711238

Topological polar surface area  681.96

Aromaticity  0.055555556

Average rotatable bonds  3.5

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  24

X logP energy  -1.29053

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.