SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17833

Signal sequence   MHFLVVYILIHFHAYRGMA

Length  19

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  P0DOE0,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17833.cif

Structure  SPKB17833.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2318.82874

Aliphatic index  123.1578947

Isoelectric point  9.179262807

Charge (pH=7)   1.269007432

Topological polar surface area  775.52

Aromaticity  0.210526316

Average rotatable bonds  3.736842105

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  28

X logP energy  0.34117

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.