SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17682

Signal sequence   MNNLWKAWVGLWTSMGPLIRLPDGITKAGEDALRPWKSTAKHPWFQIEDNRCYIDNGKLFARGSIVGNMSRFVFDPKADYGGVGENLYVHADDVEFVPGESLKWNVRNLDVMPIFETLALRLVLQGDVIWLRCVPELRVDYTSSAYMWNMQYGMVRKSYTHVAWTIVFYSINITLLVLFIVYVTVDCNLSMMWMRFFVC

Length  100

Organism  Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5)

UniProt ID  P09713,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  1IM3,

Predicted Structure ID  SPKB17682.cif

Structure  SPKB17682.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  23110.95344

Aliphatic index  94.42211055

Isoelectric point  7.378746419

Charge (pH=7)   0.030545954

Topological polar surface area  8766.2

Aromaticity  0.145728643

Average rotatable bonds  3.713567839

Number of hydrogen bond donors  311

Number of hydrogen bond acceptors  297

X logP energy  -89.54113

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.