SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17588

Signal sequence   MLSYLIFALAVSPILG

Length  16

Organism  Vesicular stomatitis New Jersey virus (strain Ogden subtype Concan) (VSNJV)

UniProt ID  P04882,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17588.cif

Structure  SPKB17588.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1708.13204

Aliphatic index  176.875

Isoelectric point  6.093198033

Charge (pH=7)   -0.002866115

Topological polar surface area  551.72

Aromaticity  0.125

Average rotatable bonds  3.25

Number of hydrogen bond donors  19

Number of hydrogen bond acceptors  21

X logP energy  -0.291

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.