SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17366

Signal sequence   MSSLICFIFLFLFSFITSFTASA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O65479,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17366.cif

Structure  SPKB17366.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2594.12144

Aliphatic index  110.4347826

Isoelectric point  5.922539791

Charge (pH=7)   -0.063990417

Topological polar surface area  845.13

Aromaticity  0.260869565

Average rotatable bonds  3.47826087

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -3.7575

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.