SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17353

Signal sequence   MDFLFLLLERKNKHMGKKRVVLLWLSIFISFSSA

Length  34

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O64780,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17353.cif

Structure  SPKB17353.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4068.98374

Aliphatic index  123.2352941

Isoelectric point  11.22219945

Charge (pH=7)   4.089928239

Topological polar surface area  1494.58

Aromaticity  0.147058824

Average rotatable bonds  4.117647059

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  51

X logP energy  -5.83166

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.